Memorias de investigación
Artículos en revistas:
Beyond filtered backprojection: A reconstruction software package for ion beam microtomography data
Año:2013
Áreas de investigación
  • Ingenierías
Datos
Descripción
A new version of the TomoRebuild data reduction software package is presented, for the reconstruction of scanning transmission ion microscopy tomography (STIMT) and particle induced X-ray emission tomography (PIXET) images. First, we present a state of the art of the reconstruction codes available for ion beam microtomography. The algorithm proposed here brings several advantages. It is a portable, multi-platform code, designed in C++ with well-separated classes for easier use and evolution. Data reduction is separated in different steps and the intermediate results may be checked if necessary. Although no additional graphic library or numerical tool is required to run the program as a command line, a user friendly interface was designed in Java, as an ImageJ plugin. All experimental and reconstruction parameters may be entered either through this plugin or directly in text format files. A simple standard format is proposed for the input of experimental data. Optional graphic applications using the ROOT interface may be used separately to display and fit energy spectra. Regarding the reconstruction process, the filtered backprojection (FBP) algorithm, already present in the previous version of the code, was optimized so that it is about 10 times as fast. In addition, Maximum Likelihood Expectation Maximization (MLEM) and its accelerated version Ordered Subsets Expectation Maximization (OSEM) algorithms were implemented. A detailed user guide in English is available. A reconstruction example of experimental data from a biological sample is given. It shows the capability of the code to reduce noise in the sinograms and to deal with incomplete data, which puts a new perspective on tomography using low number of projections or limited angle.
Internacional
Si
JCR del ISI
Si
Título de la revista
Nuclear Instruments and Methods in Physics Research B
ISSN
0168-583X
Factor de impacto JCR
Información de impacto
Volumen
295
DOI
Número de revista
Desde la página
42
Hasta la página
49
Mes
SIN MES
Ranking
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Participantes
  • Autor: Nuria Gordillo Garcia UPM
  • Autor: C. Habchi Univ. Bordeaux
  • Autor: S. Bourret Univ. Bordeaux
  • Autor: Ph. Barberet Univ. Bordeaux
  • Autor: C. Jovet Univ. Bordeaux
  • Autor: Ph. Moretto Univ. Bordeaux
  • Autor: H. Seznec Univ. Bordeaux
Grupos de investigación, Departamentos, Centros e Institutos de I+D+i relacionados
  • Creador: Grupo de Investigación: Fusión Nuclear Inercial y Tecnología de fusión
  • Centro o Instituto I+D+i: Instituto de Fusión Nuclear
  • Departamento: Ingeniería Nuclear