Observatorio de I+D+i UPM

Memorias de investigación
Communications at congresses:
R2RML-based access and querying to relational clinical data with morph-RDB
Year:2015
Research Areas
  • Engineering
Information
Abstract
Semantic interoperability is essential when carrying out post-genomic clinical trials where several institutions collaborate, since researchers and developers need to have an integrated view and access to heterogeneous data sources. In this paper we present a solution that uses an ontology based on the HL7 v3 Reference Information Model and a set of R2RML mappings that relate this ontology to an underlying relational database implementation, and where morph-RDB is used to expose a virtual SPARQL endpoint over the data. In previous efforts with other existing RDB2RDF systems we had not been able to work with live databases. Now we can issue SPARQL queries to the underlying relational data with acceptable performance, in general.%with a similar performance to having used the corresponding SQL native queries.
International
Si
Congress
Semantic Web Applications and Tools for Life Sciences
960
Place
Cambridge, England
Reviewers
Si
ISBN/ISSN
1613-0073
Start Date
07/12/2015
End Date
10/12/2015
From page
142
To page
151
Semantic Web Applications and Tools for Life Sciences Proceedings of the 8th International Conference on Semantic Web Applications and Tools for Life Sciences R2RML-based Access and Querying to Relational Clinical Data with Morph-RDB
Participants
  • Autor: Freddy Priyatna . (UPM)
  • Autor: Raul Alonso Calvo (UPM)
  • Autor: Sergio Paraiso Medina (UPM)
  • Autor: Guetón Padrón Sánchez (UPM)
  • Autor: Oscar Corcho Garcia (UPM)
Research Group, Departaments and Institutes related
  • Creador: Grupo de Investigación: Grupo de Informática Biomédica (GIB)
  • Grupo de Investigación: Ontology Engineering Group
  • Departamento: Inteligencia Artificial
  • Departamento: Lenguajes y Sistemas Informáticos e Ingeniería de Software
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